Private Boat Tours Comino – Blue Lagoon & Cave Adventures

It’s a blue you won’t forget. Not the pale, washed-out blue of a winter sky, but a startling, electric, almost impossibly vivid turquoise that seems to glow from within. The first time you glide into Comino’s Blue Lagoon, the rest of the world just melts away. The chug of the boat engine fades, the chatter of the gulls softens, and all that exists is that luminous water, beckoning you in. As a Gozitan who has spent a lifetime on these waters, I’ve seen it a thousand times, and I promise you, that feeling never, ever gets old.

But here’s a secret most visitors don’t realise: the famous Blue Lagoon is just the beginning of Comino’s magic. This tiny, rugged island, nestled between Malta and Gozo, is a treasure trove of sea caves, hidden coves, and crystal-clear waters that you can only truly discover by boat. Forget the crowded, impersonal ferries; to experience the real Comino (*Kemmuna* in Maltese), you need to explore it like a local — with the freedom to drop anchor wherever your heart desires.

Ready to plan the perfect day on the water?

Blue Lagoon, Malta with crystal-clear turquoise waters at sunrise, showing a peaceful scene that highlights the best time to visit the Blue Lagoon for fewer crowds and better visibility.
GOZOblu Private Boat Tours cruising on clear turquoise waters — the best way to get to blue lagoon in comfort and style.

Experience the best boat tours Comino with GOZOblu Private Boat Tours. Explore the famous Blue Lagoon, swim in the stunning Crystal Lagoon, and discover hidden sea caves on a private boat trip around one of Malta’s most beautiful islands.

Book your private Comino boat tour today and explore Malta’s most breathtaking waters.

CategoryDetails
LocationIsland between Malta and Gozo
Best Time to VisitEarly morning (8:30 AM) or late afternoon to beat the crowds
How to Get TherePrivate boat tour from Ċirkewwa (Malta) or Mġarr (Gozo)
Most Popular Tour4-Hour Half-Day Tour (Comino & a Touch of Gozo)
Time Needed2–8 hours depending on your chosen tour
GPS Coordinates (Blue Lagoon)36.0143° N, 14.3245° E

Why Choose a Private Boat Tour in Comino

Comino is one of the most spectacular destinations in Malta, known for its turquoise lagoons and dramatic coastline. Taking a private boat tour in Comino is widely considered the best way to explore the island.

Unlike large-group excursions or ferries, private boat tours let you visit hidden locations that most visitors never see.

With GOZOblu Private Boat Tours, you can:

This personalised experience is why many travellers consider private trips among the best Malta boat tours available. Whether you’re visiting for a few hours or planning a full boat trip to Comino, Malta, exploring the island by boat guarantees incredible views and unforgettable memories.

Imagine this: the Blue Lagoon is packed, so your skipper says, “Mhux problema (not a problem), I know a quieter spot.” You then cruise over to the Crystal Lagoon, just as beautiful but with a fraction of the people. You can swim, snorkel, and explore ancient sea caves that are completely inaccessible from land. You can spend as much or as little time as you want at each location, creating a day that is perfectly tailored to you. This is the real Comino experience.

Private Boat Tours vs Ferry Trips to Comino

Many visitors reach Comino using public ferries, large shared group tours, or private boats. Here’s how the three options compare, so you can decide which is right for you:

Who's on the boat

Just your group, full private

Flexibility

Fully flexible, your itinerary, your pace

Swimming Stops

Stop anywhere, for as long as you like

Sea Caves Access

Explore hidden caves and secret coves

Hidden Beaches

Access secluded bays only reachable by boat

Comfort

Relax on your own private boat

Personal Skipper

Your own experienced local skipper

Photo Opportunities

Stop anytime for the perfect shot

Price

Per boat (great value for families & groups)

Overall Experience

Personalised, relaxed, unforgettable

Who's on the boat

20–50+ strangers

Flexibility

Fixed route and schedule

Swimming Stops

Timed stops at set locations

Sea Caves Access

Limited to main cave stops

Hidden Beaches

Rarely included

Comfort

Shared seating with a large group

Personal Skipper

Group guide shared with everyone

Photo Opportunities

Limited by group schedule

Price

Per person

Overall Experience

Fun but crowded

Who's on the boat

Hundreds of passengers

Flexibility

Fixed route and schedule

Swimming Stops

Drop-off at Blue Lagoon only

Sea Caves Access

No cave exploration

Hidden Beaches

Not included

Comfort

Packed ferry seating

Personal Skipper

No guide

Photo Opportunities

Very limited

Price

Per person (lower cost)

Overall Experience

Basic transport to the island

For couples, families, and small groups, a private boat tour almost always works out comparable in price to a shared group tour once you factor in the per-person cost — and the experience is incomparable. Because of these advantages, many travellers consider private boat tours Comino the best way to explore the Blue Lagoon, Crystal Lagoon, and the island’s hidden caves.

Choosing Your Perfect Comino Boat Tour: Our Options

At GOZOblu, we know that every traveller is different. That’s why we offer a range of private boat tours, from a quick highlights trip to a full-day exploration. All our tours are private, meaning it’s just you, your family or friends, and your personal skipper. Here are our tour options:

Blue Lagoon, Malta with crystal-clear turquoise waters at sunrise, showing a peaceful scene that highlights the best time to visit the Blue Lagoon for fewer crowds and better visibility.

Comino Highlights

Discover Malta’s most breathtaking hidden gems on this exclusive private boat tour.

A private boat tour in Malta experience from GOZOblu

Full Comino Loop

Blast through the iconic Blue Lagoon, Comino Caves & Crystal Lagoon in 3 thrilling hours — max highlights, zero rush, pure paradise!
GOZOblu hosting guests on a private boat tour Malta, enjoying the clear blue waters and scenic coastline from the comfort of the boat.

Half-Day Tour – Comino & a Touch of Gozo

Dive deeper into Comino magic + sneak peeks of serene Gozo beaches in 4 relaxed hours — perfect balance of adventure & chill.
Boat tours curising in Comino Island

Extended Comino & Gozo

Unlock extra hidden coves, Gozo coast gems & more swim time on this 5-hour sweet spot — more exploration, less compromise.
Crystal Lagoon, Malta – A breathtaking view of turquoise waters surrounded by dramatic limestone cliffs, offering a secluded and tranquil swimming spot near Comino.

Full Comino & Gozo Highlights

All the must-see Comino spots + Gozo’s top coastline highlights in 6 unforgettable hours — the ultimate “best of both” private adventure.
A packed Blue Lagoon in Malta with crystal-clear turquoise water and anchored boats filled with tourists enjoying the popular stop on many cruises from Malta.

Full-Day Tour – Comino & Full Gozo Coastline

Epic full-day freedom: Blue Lagoon, secret caves, Gozo’s wild coastline & hidden beaches — sun, swims & memories that last forever.
Golden sunset over the Blue Lagoon Malta during a peaceful sunset boat trip, with crystal-clear waters and dramatic coastal cliffs in view. This is one of Malta top spots and ideal for comino sunset cruise tour.

Sunset Magic

Glide into golden hour on a romantic private sunset cruise — champagne, stunning Mediterranean views, and endless photo/video magic perfect for couples & special moments.

Custom Adventure

Craft your dream day on the water — pick destinations, activities, pace, and special touches for a fully personalized, unforgettable private boat experience.

Local Tip: If you want to see everything Comino has to offer without feeling rushed, the 4-Hour Half-Day Tour is our most popular choice. It gives you the perfect balance of exploring the full Comino loop and getting a taste of Gozo’s beautiful coastline.

What's Included in Every GOZOblu Tour

Every single one of our private tours, from the 2-hour highlights trip to the full 8-hour day comes with all of this included as standard:

Tours start from around €100 per hour for your whole group, not per person. Split between a family or group of friends, a private boat tour often works out comparable to, or even less than, a shared group excursion with an experience that is incomparably better.

Check availability on WhatsApp! We’ll give you an exact quote for your group size and preferred date.

The Ultimate Comino Itinerary: A Full Loop Around the Island

A boat tour isn’t just about the Blue Lagoon. It’s about discovering a coastline riddled with natural wonders. On our 3-hour and 4-hour tours, we do a full loop around Comino. Here are the incredible places we’ll show you:

Crystal-clear turquoise waters of the Blue Lagoon, Malta, surrounded by rugged limestone cliffs and bathed in golden sunlight, with boats anchored nearby and swimmers enjoying the serene paradise.

The Famous Blue Lagoon

Yes, it's famous for a reason. The water here is a breathtaking shade of cyan, thanks to the white sandy bottom reflecting the sunlight. It’s a natural swimming pool, sheltered and shallow in parts, making it perfect for a dip.

Cominotto Island, Malta, featuring crystal-clear turquoise waters, rugged cliffs, and a serene beach, ideal for private boat tours.

Cominotto Island

Opposite the Blue Lagoon lies the tiny islet of Cominotto — and it's one of the most special spots in the entire Maltese archipelago. It features a peaceful, shallow bay with a pristine sandy beach surrounded by dramatic cliffs, and a remarkable cave that cuts right through the island from one side to the other. Here's where it gets truly magical: we can take the boat to the open sea side of Cominotto, and guests can snorkel through the cave — which starts at ankle-height crystal waters and gradually deepens enough to swim through — and emerge directly onto Cominotto beach, finding themselves right in the heart of the Blue Lagoon. Some guests jump from the back of the boat and swim through the cave, stepping out onto the sand on the other side. It's one of those experiences that you simply cannot get anywhere else, and our guests absolutely love it. You may also recognise Cominotto from the big screen: Brad Pitt filmed scenes for the epic Troy (2004) here, and Madonna filmed scenes for Swept Away (2002), directed by Guy Ritchie, on this very island.

Crystal Lagoon sea caves with turquoise waters and dramatic rock formations, a stunning setting for sea cave tours.

Crystal Lagoon & Caves

Just a short cruise from the Blue Lagoon, this spot is a local favourite. This perfect for swimming & snorkelling. We also take the boat right inside the Crystal Lagoon Caves so you can explore them from the water.

St Mary’s Tower & Lovers’ Cave

An iconic landmark built by the Knights of St. John in 1618. Underneath the tower, as it stands at the top of a cliff, there is a long cave called Lovers' Cave. At the end of this cave, there is a hidden sandy beach.

Scenic view of Popeye’s Cave in Malta, showcasing its rugged limestone cliffs and crystal-clear blue waters, a hidden gem near Anchor Bay.

Popeye's Cave (*Għar Bla Saqaf*)

One of Comino's most dramatic natural spot. The roof of this ancient sea cave has collapsed over time, leaving a spectacular open-air grotto where sunlight pours straight down onto the turquoise water below. The nickname 'Popeye's Cave' comes from the 1980 film Popeye, starring Robin Williams, which was filmed in Malta. The cave's dramatic appearance featured in the movie, and the name has stuck with locals and visitors ever since. It's one of the most photographed spots on the entire island.

Santa Maria Bay, one of the best beaches in Malta best experienced by boat

Santa Marija Bay & The Historic Church

It’s one of the few sandy beaches on Comino that offers completely different vibe from the rocky lagoons. The water is clean, shallow, and calm. We can stop here so you can walk on the beach and visit the historic Chapel of the Return of Our Family from Egypt.

St Mary's Battery

The Hidden Battery Cove

On the other side of the island, at the back, lies St Mary's Battery. Underneath the battery, there is a small arch and a hidden cove that is only accessible by boat. It's a spectacular, secluded spot that many of our guests actually prefer over the main highlights!

Elephant Rock, a natural rock formation resembling an elephant

The South Coast Caves & Elephant Rock

The southern coast of Comino is wild and dramatic. We'll explore the South Coast Caves, hidden coves that you can only reach from the sea and take you to the viewpoint for Elephant Rock, a massive natural rock formation that looks exactly like an elephant drinking from the Mediterranean.

The Best Time to Visit Comino

Timing is everything when it comes to Comino. Visit at the wrong time, and you’ll be sharing the Blue Lagoon with what feels like the entire population of Europe. Visit at the right time, and you’ll feel like you have the island almost to yourself.

The Morning Strategy (Beat the Rush)

The big tour boats and ferries start arriving at the Blue Lagoon around 10:00 AM. Our best advice? Start early.

If we start your tour around 8:30 AM, we can head straight to the Crystal Lagoon first to explore some of the caves while it’s completely peaceful, and then head to the Blue Lagoon. You will experience it at its absolute quietest — sometimes, our guests have the entire lagoon to themselves! After you’ve enjoyed the Blue Lagoon in peace, the big boats will start to arrive. That’s when we leave the crowds behind and continue our loop to the hidden caves and coves where there aren’t any people at all.

The Late Afternoon Strategy

If you prefer a later start, a late afternoon tour is also fantastic. As the day-trippers leave, a sense of peace descends on the island. The low sun makes the cliffs glow, and the water takes on a golden hue; it’s a completely different, magical atmosphere.

The Midday Strategy (Peak Hours)

If midday is the only time that works for you, don’t worry, we’ve got you covered. During peak hours, the Blue Lagoon is at its busiest, but your skipper knows exactly where to anchor to find you the best spot in the lagoon so you can still enjoy the famous turquoise water. Once you’ve had your swim, we’ll move on to the quieter parts of the island, the Crystal Lagoon, the hidden caves, and the secret coves where you’ll often find you have the place entirely to yourselves.

We can assure you that any time you book, we will find a way to make it memorable. Some guests actually love the vibrant, buzzing atmosphere of the Blue Lagoon at its peak, it’s part of the Comino experience!

GOZOblu Private Boat Tours cruising in the Mediterranean

How to Get to Your Comino Boat Tour Departure Point

We offer flexible departure points depending on where you are staying in the Maltese islands:

  • From Malta (Ċirkewwa): If you are staying on the main island of Malta, we can pick you up directly from Ċirkewwa, right at the northern tip of the island.
  • From Gozo (Mġarr Harbour): If you are staying in Gozo, we depart from Mġarr Harbour, which is easily accessible by bus or taxi from anywhere on the island.

Local Tip for Valletta Guests: If you are staying in Valletta, taking a taxi all the way up to Ċirkewwa can be slow due to traffic. Instead, it will be cheaper to get the Fast Ferry from Valletta directly to Gozo (Mġarr Harbour). Depending on the weather, it takes just 35-45 minutes and drops you right where our boats depart! After your boat tour, you can spend the afternoon exploring Gozo or having a lovely dinner by the harbour before catching the fast ferry back to Valletta.

What to Pack for Your Comino Adventure

Packing light is key, but a few essentials will make your day much more comfortable.

  • Swimwear & Towel: Obvious, but essential!
  • Sun Protection: High-factor sunscreen, a wide-brimmed hat, and sunglasses are non-negotiable. The Maltese sun is strong, especially when reflected off the water.
  • Reef Shoes or Aqua Socks: Highly recommended. Much of Comino’s coastline is rocky, and these will protect your feet and make it much easier to explore.
  • Camera or GoPro: You will want to capture the colour of the water. An underwater camera is perfect for the Crystal Lagoon.
  • Light Cover-Up: A t-shirt or kaftan is useful for when you want a break from the sun.

Frequently Asked Questions

While you can get there by ferry, a boat tour is the only way to see the best of Comino, including the Crystal Lagoon, the sea caves, and the hidden coves under St Mary’s Battery that are completely inaccessible from land.

Our tours range from 2 hours to a full 8-hour day. Our most popular tour is the 4-Hour Half-Day Tour, which gives you enough time to do a full loop of Comino plus a touch of Gozo’s coastline without feeling rushed.

Our Premium Boat is equipped with a small marine toilet for your convenience. Our Standard Boat does not have a toilet on board. However, if you need to use facilities during the tour, we can easily make a quick land stop at Santa Marija Bay, which has public toilets. We try to avoid stopping at the Blue Lagoon for toilet breaks during busy times, as the queues for the dock and the facilities can be very long!

It can be, especially in July and August. However, if you book an early morning private boat tour (starting around 8:30 AM), we can get you to the Blue Lagoon before the crowds arrive at 10:00 AM. Alternatively, a late afternoon tour offers a much quieter experience as the day-trippers leave.

We will let you know which are safe to swim in, as some have boats exploring all the time and although you can swim in them, it’s better to find a quiet one where you can have some time to enjoy. We have a secret location that our guests really enjoy for a peaceful swim! Your skipper’s number one priority is your safety.

Your safety is our priority. If the weather or sea conditions are not safe for a tour, we will contact you to either reschedule or offer a full refund.

Taste, Explore & Discover Malta & Gozo

There is no better way to spend a day in the Maltese islands than out on the water, and Comino is our crown jewel. It’s a place of pure, natural beauty that will stay with you long after you’ve returned home. We’d love to be the ones to show you its secrets.

Ready to dive in? Check Availability on WhatsApp to start planning your perfect day at sea!