Comino and Blue Lagoon Cruise: Malta Island Adventures for Cruise Guests

Comino and Blue Lagoon Cruise: Malta Island Adventures for Cruise Guests

Stepping off your cruise ship in Valletta opens the door to one of the Mediterranean’s most spectacular natural wonders, the azure paradise of comino and blue lagoon cruise. As your ship docks in the grand harbour of Malta’s capital, you’re just hours away from swimming in some of the clearest turquoise waters you’ll ever experience.

But here’s the thing about cruise stops; time is precious. You can’t afford to waste a minute figuring things out on the fly. That’s why we’ve created this guide specifically for you, the cruise passenger who wants to make the absolute most of your limited time in Malta.

Let’s dive into everything you need to know about visiting this slice of Mediterranean heaven while ensuring you get back to your ship with time to spare.

1. Malta's Blue Lagoon :A Cruise Passenger's Guide

Crystal-clear turquoise waters of the Blue Lagoon, Malta, surrounded by rugged limestone cliffs and bathed in golden sunlight, with boats anchored nearby and swimmers enjoying the serene paradise.

The Blue Lagoon is one of Malta’s most iconic natural sights famous for its almost unreal turquoise water, calm shallow bay, and rugged coastal beauty. Tucked between the islands of Comino and Cominotto, it’s a top bucket-list destination for visitors and for good reason.

If you’re visiting Malta on a cruise, this could easily be the highlight of your shore excursion, but you’ll want to plan smartly to make the most of your limited time. One of the best ways to ensure a stress-free, memorable visit is by choosing the right tour option especially a private one. In fact, we break down exactly why in our blog: Why Booking a Private Boat Tour is the Best Way to Experience the Blue Lagoon Malta.

Quick Guide for Cruise Passengers

What is the Blue Lagoon, Malta?

A stunning, sheltered bay with crystal-clear blue waters perfect for swimming, snorkelling, and relaxing.

It’s located between the islands of Comino and Cominotto, located north of Malta.

  • Incredibly vivid, turquoise water
  • Calm, shallow bay ideal for swimming
  • Striking contrast of blue sea and golden cliffs
  • One of the most photogenic spots in Malta

Visiting the Blue Lagoon is definitely doable in just a few hours even on a 2-hour boat tour. With a well-planned short tour, you can experience the lagoon’s crystal-clear waters and stunning scenery without feeling rushed. Plus, a 2-hour tour leaves you plenty of time to continue exploring other highlights around Malta, whether it’s charming coastal spots or other islands nearby, depending on how much time you have available.

  • Getting there:
    • Fastest option: Pre-book a private boat tour with GOZOblu. We can pick you up near Valletta port.
    • Budget-friendly option: Taxi to Cirkewwa or Marfa (north of Malta), then take a public ferry to Comino (approx. 25 minutes).
  • Best time to go:
    • Early morning (before 10am) or late afternoon (after 3:30pm) to dodge peak crowds.
    • Avoid midday hours when most day-trippers arrive.
  • What to bring:
    • Swimsuit, towel, sun protection (very little shade)
    • Water and snacks (food options on Comino are limited and basic)
    • Snorkel gear. If you opt for a private boat tour with GOZOblu, we can provide snorkelling gear

Bonus tip:
Walk away from the main beach area to find quieter swimming spots along the rocks or by Cominotto island.

2. Planning Your Blue Lagoon Excursion: Cruise Ship Logistics

People swimming in the crystal-clear waters of the Blue Lagoon Malta

Understand Your Cruise Schedule

Before you book any Malta private boat tours, it’s essential to check your cruise itinerary. The key details to note:

  • Docking time in Valletta
  • All aboard time (not just departure time!)
  • Total hours in port

For a relaxed and enjoyable private boat tour to the Blue Lagoon Malta, we recommend a minimum of 8 hours in port. This gives you enough time for transport, boarding, and at least 3–4 hours at the Blue Lagoon itself.

If your ship arrives at 8:00 AM and the latest boarding is 5:00 PM, you’re in the ideal window. Shorter stays (e.g., 6 hours) are still doable but may require a more time-efficient option like a speedboat or private charter, which we’ll cover below

Planning your day in Malta? Check out our guide to the Top 5 Must-Do Shore Excursions in Malta for Cruise Ship Passengers for more ideas on how to make the most of your limited time ashore..

Getting from Valletta Cruise Port to Boat Departure Points

When your ship docks at the Valletta Cruise Terminal, you have several options to reach the departure points for Comino tours and Blue Lagoon Malta boat trips:

From Valletta to Sliema (20–30 minutes):

  • Taxi: €15–20 – fastest, around 10–15 minutes
  • Bus (Route 13 or 14): €2 – 20 to 30 minutes depending on traffic
  • Walking: Free, around 25–30 minutes along a scenic harbour route

From Valletta to Buġibba (35–45 minutes):

  •  Taxi: €25–30 – about 25 minutes
  • Bus (Route 31): €2 – around 45–60 minutes

From Valletta to Cirkewwa (45–60+ minutes):

  • Taxi: €35–40 – about 40 minutes
  • Bus (Route 41/42): €2 – 60 to 75 minutes

Pro Tip for Cruise Passengers:
For maximum convenience, either book a tour that includes cruise terminal pickup, or take a taxi to Sliema, which offers the shortest overland journey and quicker access to Comino tours. Sliema is a popular starting point for Blue Lagoon Malta boat trips, although travel time to Comino is slightly longer than from Cirkewwa.

Cruise Line Excursions vs. Independent Tour Operators

One of the biggest decisions you’ll make is whether to book your boat trip to Comino Malta through your cruise line or with an independent operator like GOZOblu Private Boat Tours.

Booking through your cruise line:

✅ Guaranteed return to ship
✅ All transportation handled
✅ Ship may wait if tour is delayed
❌ More expensive (usually 30–50% higher)
❌ Larger, less personal groups
❌ Fixed itinerary with limited flexibility

Booking with independent operators like GOZOblu Private Boat Tours:

✅ Smaller, more personalised experiences
✅ More flexible itineraries
✅ Often more time at the famous Blue Lagoon and can include Crystal Lagoon
❌ You’re responsible for transport and timing
❌ Must carefully plan your return

Our Recommendation:
If peace of mind is your priority or you’re new to international travel, cruise excursions are a safe bet. But if you’re comfortable with local logistics and want a more exclusive, tailored experience, choose a trusted independent provider like GOZOblu.

Why Choose GOZOblu Private Boat Tours?

GOZOblu boat cruising through the clear blue waters on a Comino and Blue Lagoon cruise, with the scenic Maltese coastline in the background.

GOZOblu offers bespoke private boat tours to Blue Lagoon Malta, crafted specifically for cruise guests with limited time. Every detail is designed to make the most of your day in port with comfort, style, and flexibility.

Here’s why GOZOblu Private Boat Tours is a standout choice:

  • Flexible schedules to align with your cruise ship’s arrival and departure times
  • Convenient departure from Sliema – ideal for cruise passengers
  • Private charters for couples, families, or small groups
  • Comino sunset cruise options for ships with later port calls
  • Experienced skippers who know how to avoid the crowds and find hidden gems
  • Customised itineraries including swimming spots, caves of Comino, and secluded bays in the island of Gozo
  • Included extras: GoPro camera for capturing your adventure, snorkelling gear, complimentary bottled water, and a light snack on board

Whether you’re after a peaceful visit to Comino island, a scenic Blue Lagoon Malta boat trip, or a romantic Comino sunset cruise, GOZOblu Private Boat Tours ensures your limited time is spent in luxury not in transit or surrounded by large catamaran tour groups.

Pre-booking vs. Day-of Booking

For cruise passengers, pre-booking is highly recommended, especially in peak months:

  • June–September: Tours often sell out days in advance
  • April–May / October: Booking 1–2 days ahead is usually enough
  • November–March: Same-day bookings possible, but check sea conditions

Where to Book a Private Boat Tour

Book directly through GOZOblu for the best availability and direct communication.

3. Choosing the Right Blue Lagoon Tour for Cruise Passengers

Private boat tour of Comino, Malta, with crystal-clear waters and scenic coastal views, showcasing a group aboard a boat exploring the island’s beauty.

Types of Comino and Blue Lagoon Cruise Boat Tour

Not all Blue Lagoon Malta boat trips are created equal. Whether you’re drawn to the crystal clear waters of Comino Island or want to explore the hidden caves of Comino, it’s important to choose a tour that fits your time, comfort level, and budget. Here’s a breakdown of your options:

Large Group Tours (50+ passengers)

  • Cost: €20–30 per person
  • Pros: Most affordable, frequent departures, full onboard facilities
  • Cons: Crowded, less personal, fixed itinerary
  • Best for: Budget-conscious travellers who don’t mind crowds

Medium Group Tours (15–30 passengers)

  • Cost: €30–50 per person
  • Pros: Less crowded, often include a short visit to Comino, may explore the Santa Maria caves or parts of the Crystal Lagoon
  • Cons: Fewer amenities, less flexible schedules
  • Best for: A balance of value and experience

Small Group Tours (6–12 passengers)

  • Cost: €50–70 per person
  • Pros: More personalised, flexible routes, access to quiet coves and Comino caves
  • Cons: Higher cost, fewer facilities, weather-dependent
  • Best for: Those seeking a more intimate adventure

GOZOblu offers tailored private boats that are perfect for cruise passengers. With full control over your route, you can swim in the crystal clear waters, visit both Blue Lagoon and Crystal Lagoon, explore the Santa Maria caves, and still make a timely cruise back. GOZOblu Private Boat Tours is a top-tier choice, perfect for making the most of your limited hours in Malta.

4. Timing Strategies: Beating the Crowds as a Cruise Passenger

For cruise passengers, this timing knowledge is gold. If your ship docks early morning, aim for the earliest possible tour departure; usually 9:00am from Sliema, 9:30am from Bugibba.

If your ship docks mid-day, consider either:

  1. A late afternoon tour (departing around 2pm) to catch the Blue Lagoon as crowds thin
  2. Booking a tour that visits alternate spots on Comino first and stop in the Blue Lagoon later

Most comino tour operators follow nearly identical schedules, bringing hundreds of visitors to Blue Lagoon simultaneously. The key is finding operators with slightly offset timetables.

Early Bird Strategies for Morning Cruise Arrivals

If you’re lucky enough to have an early port arrival (7:30-8:30am), seize this golden opportunity! Here’s your gameplan:

  1. Book a pre-arranged taxi (Taxify, eCabs, Uber, or Bolt app) to meet you at the cruise terminal
  2. Head directly to Sliema Ferry for the 9:00am departures
  3. Choose a tour operator like GOZOblu who offer early bird departures
  4. Request (in advance) to be dropped at Blue Lagoon first, before other stops

This strategy puts you at the Blue Lagoon around 9:45-10:00am before the masses arrive. You’ll get pristine waters, empty swimming areas, and perfect photos without hundreds of other visitors.

Morning light conditions also provide the most vibrant turquoise color in the lagoon’s waters, ideal for those Instagram-worthy shots.

Late Afternoon Advantages for Evening Departures

If your ship has a late departure (7pm or later), the afternoon strategy works brilliantly:

  1. Book a tour departing around 2:00-2:30pm
  2. Arrive at Blue Lagoon around 3:00-3:30pm as day-trippers begin leaving
  3. Enjoy progressively emptier swimming areas until 5:30pm
  4. Experience beautiful golden light for photography around 5:00-6:00pm
  5. Return to Valletta by 6:30pm for a comfortable ship return

The afternoon light creates a magical golden glow on the limestone cliffs surrounding the lagoon, while the thinning crowds make for a more peaceful experience.

5. Exploring Comino Island Beyond the Blue Lagoon

While the Blue Lagoon gets all the fame, Comino Island offers several other spectacular spots that cruise visitors often miss, many with a fraction of the crowds.

Private boat near me GOZOblu BLue Lagoon

Lesser-Known Spots Perfect for Cruise Passengers

Santa Maria Bay

Just a 15-minute walk from Blue Lagoon, this crescent-shaped bay offers:

  • Sandy entry to the water (rare in Malta)
  • Significantly fewer people
  • Small beach kiosk for refreshments
  • Natural shade from surrounding trees

Many boat trip to comino malta operators will happily drop you here instead of Blue Lagoon if requested in advance. The swimming is equally spectacular but with breathing room!

Crystal Lagoon

Located on Comino’s west coast, Crystal Lagoon features:

  • Deeper, darker blue water (great for jumping)
  • Dramatic cliff surroundings
  • Cave swimming opportunities
  • 80% fewer visitors than Blue Lagoon

The catch? Fewer boats go here, so you’ll need to specifically book a tour that includes Crystal Lagoon (GOZOblu Private Boat Tours offer this).

San Niklaw Bay

This hidden gem on Comino’s southeast offers:

  • Complete tranquility away from crowds
  • Perfect snorkelling conditions
  • Dramatic cliff backdrop
  • No facilities (bring everything you need)

Very few group tours stop here, making it perfect for private charters or adventurous walkers. From Blue Lagoon, it’s about a 25-minute walk.

Walking Paths and Nature on Comino

Comino’s compact size (just 3.5 sq km) makes it perfect for short walks that fit into a cruise schedule. The island offers:

  • Well-marked trails connecting major points of interest
  • Stunning cliff-top views overlooking the Mediterranean
  • Unique Mediterranean flora, especially in spring when wildflowers bloom
  • Flat, easy terrain suitable for most fitness levels

The walk from Blue Lagoon to Santa Maria Bay takes just 15 minutes and offers spectacular views. If you have 45 minutes to spare, the path to St. Mary’s Tower rewards you with panoramic vistas over both Comino and neighbouring Gozo.

Historical Sites Worth Your Time

St. Mary's Tower

This imposing 17th-century watchtower stands as Comino’s most prominent landmark:

  • Featured in the film “The Count of Monte Cristo”
  • Recently restored and open to visitors (€4 entry)
  • Offers 360° views from the roof
  • Houses a small exhibition on Comino’s history

The tower is a 20-minute walk from Blue Lagoon, making it feasible even within a time-constrained cruise visit. The views alone are worth the effort, giving you perspective on Comino’s strategic position between Malta and Gozo.

The Old Isolation Hospital

Dating back to the early 1900s, these atmospheric abandoned buildings have a fascinating history:

  • Originally built as isolation for plague victims
  • Later served as a winter residence for knights
  • Now hauntingly photogenic ruins
  • Located near Santa Maria Bay

While you can’t enter the buildings, walking around them provides a glimpse into Comino’s past beyond its current role as a tourist destination.

6. Making the Most of Your Cruise Visit to Blue Lagoon

Sample Itineraries Based on Your Cruise Schedule

For GOZOblu’s Private Blue Lagoon Tour (Departs from Ċirkewwa)

Note: Cruise guests will need to take a taxi to Ċirkewwa (approx. €30–€40, ~50 min drive).

Early Arrival (8am dock) Itinerary:

  • 8:15 AM – Disembark and take a taxi directly to Ċirkewwa
  • 9:15 AM – Arrive in Ċirkewwa for check-in and boarding
  • 9:30 AM – Depart on private Blue Lagoon cruise before major crowds
  • 10:15 AM–1:00 PM – Swim, explore Comino’s caves, snorkel at the Blue Lagoon
  • 1:00–2:00 PM – Enjoy lunch onboard or at kiosks on Comino
  • 2:00–3:00 PM – Optional stop: Santa Maria Bay or hike to St. Mary’s Tower
  • 3:15 PM – Begin scenic return to Ċirkewwa
  • 4:15 PM – Taxi back to Valletta cruise terminal
  • 5:15 PM – Back aboard ship with plenty of time to spare

Mid-Day Arrival (11am dock) Itinerary:

  • 11:15 AM – Disembark and take a taxi to Ċirkewwa
  • 12:15 PM or 2:00 PM – Depart on private afternoon cruise (based on your ship’s departure time)
  • 1:00–3:00 PM or 3:00–5:00 PM – Explore the Blue Lagoon as the crowds thin
  • Return time adjusted to ensure timely arrival back at port
  • 6:15–7:00 PM – Back aboard ship depending on your cruise schedule

Late Departure Special: Private Sunset Cruise (Ship Departs 9:00 PM or Later)

  • 3:00 PM – Disembark and take a taxi to Ċirkewwa
  • 4:00 PM – Depart on a romantic evening cruise
  • 5:00–7:00 PM – Enjoy the Blue Lagoon with few people around
  • 7:00–8:00 PM – Return to Ċirkewwa during golden hour
  • 8:15 PM – Back at cruise terminal with time to spare

Frequently Asked Questions

1. Can I visit both Blue Lagoon and Valletta in one cruise day?

Yes, but it requires careful planning. The most efficient approach:

  • Early morning Blue Lagoon tour (9am-2pm)
  • Late afternoon/evening in Valletta (3pm-7pm)
  • Skip lunch to maximise sightseeing time
  • Focus on Valletta highlights: Upper Barrakka Gardens, St. John’s Co-Cathedral, Grand Master’s Palace
  • Consider a pre-arranged walking tour for efficiency

Absolutely! Non-swimmers can:

  • Wade in very shallow areas with crystal clear visibility
  • Enjoy the stunning views from various vantage points
  • Join boat tours that offer sea-level platforms for sitting with feet in water
  • Use flotation devices available for rent
  • Enjoy the atmosphere and scenery without full immersion

Yes, the Blue Lagoon is absolutely worth visiting for its stunning crystal clear waters, vibrant marine life, and breathtaking views of Comino Island. It’s one of Malta’s top natural attractions.

The Blue Lagoon is famous for its turquoise waters, white sandy seabed, and scenic surroundings. It’s a top spot for swimming, snorkeling, and exploring the nearby caves of Comino and Crystal Lagoon.

Early morning (before 10am) or late afternoon (after 4pm) are the best times to visit. These times avoid peak crowds and let you enjoy a more peaceful experience, especially on private or small-group tours.